Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm12040-201ENSMUST00000118357 537 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm15971-201ENSMUST00000119372 211 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm8430-201ENSMUST00000119780 471 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm15959-201ENSMUST00000121724 368 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm23539-201ENSMUST00000157537 224 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm23259-201ENSMUST00000158318 303 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm25065-201ENSMUST00000177914 132 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm25891-201ENSMUST00000180050 132 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm2539-203ENSMUST00000181352 746 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Mir7008-201ENSMUST00000184398 63 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm37511-201ENSMUST00000192901 294 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm43655-201ENSMUST00000197367 222 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm4510-201ENSMUST00000218265 427 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm9292-201ENSMUST00000222008 710 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Smc1aQ9CU62 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm26067-201ENSMUST00000103789 110 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm14756-201ENSMUST00000116395 240 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm14382-201ENSMUST00000117374 437 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm11848-201ENSMUST00000121207 973 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm22210-201ENSMUST00000158101 144 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm8869-201ENSMUST00000195222 947 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm2996-201ENSMUST00000211398 537 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm18592-201ENSMUST00000221529 276 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.69□□□□□ -1.34
Smc1aQ9CU62 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Smc1aQ9CU62 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms