Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm15332-201ENSMUST00000118386 357 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm28066-201ENSMUST00000188657 472 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm37341-201ENSMUST00000194680 371 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm37871-201ENSMUST00000194973 688 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm42708-201ENSMUST00000196332 905 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm7413-201ENSMUST00000219498 462 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm18620-201ENSMUST00000222295 324 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 AV026068-237ENSMUST00000226075 572 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Lsm1Q8VC85 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm24069-201ENSMUST00000104512 127 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm12643-201ENSMUST00000116078 374 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm15400-201ENSMUST00000118944 601 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm14018-201ENSMUST00000119042 455 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm12375-201ENSMUST00000119331 921 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm16016-201ENSMUST00000120831 550 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm15801-201ENSMUST00000120920 522 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm13531-201ENSMUST00000121893 543 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm8783-201ENSMUST00000159764 522 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm22690-201ENSMUST00000175054 110 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm22642-201ENSMUST00000175352 252 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Mir7058-201ENSMUST00000184637 75 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm43222-201ENSMUST00000199013 603 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm44316-201ENSMUST00000199274 97 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm43033-201ENSMUST00000199682 425 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm5055-201ENSMUST00000215697 581 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm5582-201ENSMUST00000075251 522 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm6104-201ENSMUST00000078030 603 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Gm23927-201ENSMUST00000082466 215 ntBASIC5.65□□□□□ -1.5
Lsm1Q8VC85 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lsm1Q8VC85 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Lsm1Q8VC85 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Lsm1Q8VC85 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lsm1Q8VC85 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.64□□□□□ -1.51
Lsm1Q8VC85 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lsm1Q8VC85 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms