Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm13052-201ENSMUST00000125582 769 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Hk1os-202ENSMUST00000142968 343 ntTSL 3 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm17450-201ENSMUST00000164671 426 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm7678-201ENSMUST00000181879 943 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm7893-201ENSMUST00000189666 225 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm28164-201ENSMUST00000190143 442 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm37568-201ENSMUST00000191755 364 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm36976-201ENSMUST00000192632 1110 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm8823-201ENSMUST00000193158 433 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm38053-201ENSMUST00000193938 160 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Igkv9-128-201ENSMUST00000196602 353 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm43142-201ENSMUST00000198670 361 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm9364-201ENSMUST00000199220 460 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm44426-201ENSMUST00000204258 355 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Psenen-202ENSMUST00000207031 316 ntTSL 3 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm18455-201ENSMUST00000208768 459 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 AC125374.2-201ENSMUST00000214278 162 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm3800-201ENSMUST00000221086 554 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Apoc1-201ENSMUST00000045035 432 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm25078-201ENSMUST00000082530 107 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm25930-201ENSMUST00000082785 107 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Rnf185-202ENSMUST00000077078 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 AC129085.3-201ENSMUST00000225686 1705 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Pttg1-204ENSMUST00000117446 1674 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trim35Q8C006 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trim35Q8C006 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC8.9□□□□□ -0.99
Trim35Q8C006 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim35Q8C006 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim35Q8C006 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim35Q8C006 AC138716.1-201ENSMUST00000226350 2959 ntBASIC8.9□□□□□ -0.99
Trim35Q8C006 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim35Q8C006 Ap1b1-202ENSMUST00000101613 3735 ntTSL 5 BASIC8.9□□□□□ -0.99
Trim35Q8C006 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trim35Q8C006 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.9□□□□□ -0.99
Trim35Q8C006 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC8.9□□□□□ -0.99
Trim35Q8C006 Gm4907-201ENSMUST00000116614 1493 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Crxos-202ENSMUST00000125993 2246 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Pms2-202ENSMUST00000110709 1386 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Fmo6-201ENSMUST00000178465 1691 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Nat10-201ENSMUST00000028608 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Hbp1-202ENSMUST00000172314 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 AC120425.1-201ENSMUST00000225213 2360 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm25538-201ENSMUST00000101943 107 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Mir881-201ENSMUST00000104844 78 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm16089-201ENSMUST00000117679 336 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm14049-201ENSMUST00000121009 636 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm25235-201ENSMUST00000179933 107 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm43846-201ENSMUST00000200502 932 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm6520-201ENSMUST00000200636 410 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm7838-201ENSMUST00000203221 1189 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm44795-201ENSMUST00000205496 319 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm7675-201ENSMUST00000208828 686 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm19326-201ENSMUST00000219818 326 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 AC154282.1-201ENSMUST00000223154 265 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm24145-201ENSMUST00000082631 163 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm22508-201ENSMUST00000082772 110 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm16485-201ENSMUST00000104915 3983 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm10619-202ENSMUST00000186073 3287 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Olfr549-202ENSMUST00000217478 1891 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Cnga3-201ENSMUST00000027288 3554 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gm43465-201ENSMUST00000200367 2802 ntBASIC8.89□□□□□ -0.99
Trim35Q8C006 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms