Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm23502-201ENSMUST00000083902 145 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm12077-201ENSMUST00000117049 364 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm13493-201ENSMUST00000120318 493 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Mup-ps28-201ENSMUST00000120686 289 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm5401-201ENSMUST00000122444 365 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm4764-201ENSMUST00000130207 1233 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm23280-201ENSMUST00000157905 139 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm24731-201ENSMUST00000158227 131 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm25439-201ENSMUST00000158280 131 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Mir3572-201ENSMUST00000175549 86 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm19086-201ENSMUST00000190772 665 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm18407-201ENSMUST00000192126 790 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm2691-201ENSMUST00000203205 901 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm7890-201ENSMUST00000204877 601 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 AC107711.2-203ENSMUST00000227827 762 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 CT025523.1-201ENSMUST00000228318 694 ntBASIC8.34□□□□□ -1.07
Usp40Q8BWR4 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC8.34□□□□□ -1.07
Usp40Q8BWR4 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Usp40Q8BWR4 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm23910-201ENSMUST00000104597 132 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm14854-201ENSMUST00000117758 841 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm7927-201ENSMUST00000118818 880 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm13438-201ENSMUST00000120100 573 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm12482-201ENSMUST00000120435 630 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm12383-201ENSMUST00000120628 760 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Gm37235-201ENSMUST00000195171 59 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 AC158631.2-201ENSMUST00000219999 478 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 AC192616.3-201ENSMUST00000220797 1124 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 CU062626.1-201ENSMUST00000225248 505 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 AC174459.1-201ENSMUST00000224476 1943 ntBASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp40Q8BWR4 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm37951-201ENSMUST00000192963 3032 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm13770-201ENSMUST00000117149 305 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm15233-201ENSMUST00000118747 400 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Klra14-ps-201ENSMUST00000119532 802 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm14840-201ENSMUST00000122135 594 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm26106-201ENSMUST00000157254 228 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Gm22867-201ENSMUST00000157499 109 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Esd-ps-201ENSMUST00000170684 847 ntBASIC8.32□□□□□ -1.08
Usp40Q8BWR4 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms