Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm44652-201ENSMUST00000208648 2854 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm10764-202ENSMUST00000220397 2335 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm13224-201ENSMUST00000119586 94 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm45008-201ENSMUST00000206420 493 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm23238-201ENSMUST00000083007 164 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm37403-201ENSMUST00000193775 3521 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm43181-201ENSMUST00000197001 2072 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Prkaa1-202ENSMUST00000228218 4618 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm44185-201ENSMUST00000204539 3307 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm13000-201ENSMUST00000120937 496 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm14796-201ENSMUST00000121216 959 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm15075-201ENSMUST00000122187 477 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm25826-201ENSMUST00000157090 137 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Mir6410-201ENSMUST00000184204 104 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm45209-201ENSMUST00000207122 353 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm23626-201ENSMUST00000082458 133 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm37648-201ENSMUST00000192072 2563 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Gm43279-201ENSMUST00000202376 2512 ntBASIC5.49□□□□□ -1.53
Spg11Q3UHA3 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm12874-201ENSMUST00000117190 913 ntBASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm43561-201ENSMUST00000199866 448 ntBASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm45739-201ENSMUST00000213094 388 ntBASIC5.48□□□□□ -1.53
Spg11Q3UHA3 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm7887-201ENSMUST00000056948 537 ntBASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm24706-201ENSMUST00000082806 137 ntBASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.48□□□□□ -1.53
Spg11Q3UHA3 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms