Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm44316-201ENSMUST00000199274 97 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm43919-201ENSMUST00000204303 364 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC9.21□□□□□ -0.93
Col17a1Q07563 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm7557-201ENSMUST00000221935 865 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm4822-201ENSMUST00000077551 479 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm25131-201ENSMUST00000082653 151 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.21□□□□□ -0.93
Col17a1Q07563 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Col17a1Q07563 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col17a1Q07563 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col17a1Q07563 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col17a1Q07563 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Col17a1Q07563 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col17a1Q07563 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Col17a1Q07563 Ap5m1-208ENSMUST00000228238 3514 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.21□□□□□ -0.94
Col17a1Q07563 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col17a1Q07563 AC153152.1-201ENSMUST00000221105 2742 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Col17a1Q07563 AC138765.2-202ENSMUST00000228418 3435 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm24265-201ENSMUST00000101833 141 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Col17a1Q07563 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.94
Col17a1Q07563 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm13604-201ENSMUST00000119332 482 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm15075-201ENSMUST00000122187 477 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm5699-201ENSMUST00000152491 723 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm9006-201ENSMUST00000165520 841 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm22122-201ENSMUST00000175147 200 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm24407-201ENSMUST00000177864 141 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm8221-201ENSMUST00000178052 564 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm42459-201ENSMUST00000199679 742 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 Gm2961-201ENSMUST00000211074 772 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 AC154627.3-201ENSMUST00000228441 334 ntBASIC9.21□□□□□ -0.94
Col17a1Q07563 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col17a1Q07563 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col17a1Q07563 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col17a1Q07563 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col17a1Q07563 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col17a1Q07563 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col17a1Q07563 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col17a1Q07563 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm7337-202ENSMUST00000181439 2655 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm37589-201ENSMUST00000193609 3994 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Col17a1Q07563 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm23193-201ENSMUST00000102427 82 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm11346-201ENSMUST00000118346 704 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm15158-201ENSMUST00000120577 570 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm7973-201ENSMUST00000122107 488 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm25665-201ENSMUST00000157695 110 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC9.2□□□□□ -0.94
Col17a1Q07563 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm37709-201ENSMUST00000195074 600 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 CT010480.1-201ENSMUST00000223612 363 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm22741-201ENSMUST00000083438 165 ntBASIC9.2□□□□□ -0.94
Col17a1Q07563 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col17a1Q07563 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC9.2□□□□□ -0.94
Col17a1Q07563 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms