Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm23806-201ENSMUST00000175157 109 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm5947-201ENSMUST00000179156 714 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm5645-201ENSMUST00000179597 714 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm5582-201ENSMUST00000075251 522 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm4822-201ENSMUST00000077551 479 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm15732-201ENSMUST00000079794 480 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Sox9Q04887 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Sox9Q04887 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox9Q04887 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.74□□□□□ -1.33
Sox9Q04887 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox9Q04887 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox9Q04887 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox9Q04887 Mir193b-201ENSMUST00000103784 79 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.74□□□□□ -1.33
Sox9Q04887 Gm13245-201ENSMUST00000119646 260 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm13808-201ENSMUST00000121353 184 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm8761-201ENSMUST00000121507 955 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm16471-201ENSMUST00000121940 618 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm12650-201ENSMUST00000121966 258 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm25669-201ENSMUST00000157699 112 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.74□□□□□ -1.33
Sox9Q04887 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox9Q04887 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox9Q04887 Gm23945-201ENSMUST00000179609 92 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Vis1-201ENSMUST00000183957 201 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm27409-201ENSMUST00000184727 80 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm8869-201ENSMUST00000195222 947 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Gm37358-201ENSMUST00000195492 479 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Sox9Q04887 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox9Q04887 Gm42857-201ENSMUST00000200823 339 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox9Q04887 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox9Q04887 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox9Q04887 AC192616.1-201ENSMUST00000221922 132 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Sox9Q04887 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox9Q04887 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 AU020206-202ENSMUST00000206358 3009 ntBASIC6.74□□□□□ -1.33
Sox9Q04887 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox9Q04887 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox9Q04887 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms