Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm34224-201ENSMUST00000204606 364 ntBASIC6.43□□□□□ -1.38
NcanP55066 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.43□□□□□ -1.38
NcanP55066 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.43□□□□□ -1.38
NcanP55066 Gm20368-201ENSMUST00000220716 301 ntBASIC6.43□□□□□ -1.38
NcanP55066 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.43□□□□□ -1.38
NcanP55066 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.43□□□□□ -1.38
NcanP55066 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NcanP55066 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NcanP55066 Gm23459-201ENSMUST00000083259 131 ntBASIC6.43□□□□□ -1.38
NcanP55066 Mir342-201ENSMUST00000083502 99 ntBASIC6.43□□□□□ -1.38
NcanP55066 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NcanP55066 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.43□□□□□ -1.38
NcanP55066 Malat1-201ENSMUST00000172812 6983 ntBASIC6.43□□□□□ -1.38
NcanP55066 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.43□□□□□ -1.38
NcanP55066 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.43□□□□□ -1.38
NcanP55066 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.43□□□□□ -1.38
NcanP55066 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.43□□□□□ -1.38
NcanP55066 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
NcanP55066 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
NcanP55066 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
NcanP55066 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NcanP55066 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NcanP55066 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NcanP55066 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.42□□□□□ -1.38
NcanP55066 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.42□□□□□ -1.38
NcanP55066 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
NcanP55066 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.42□□□□□ -1.38
NcanP55066 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NcanP55066 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 Gm12074-201ENSMUST00000120189 219 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm15877-201ENSMUST00000121897 964 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.42□□□□□ -1.38
NcanP55066 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC6.42□□□□□ -1.38
NcanP55066 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 Gm26357-201ENSMUST00000158218 115 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm22993-201ENSMUST00000175423 254 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC6.42□□□□□ -1.38
NcanP55066 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.42□□□□□ -1.38
NcanP55066 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.42□□□□□ -1.38
NcanP55066 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.42□□□□□ -1.38
NcanP55066 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm7733-201ENSMUST00000199038 919 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm4548-201ENSMUST00000208487 509 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.42□□□□□ -1.38
NcanP55066 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.42□□□□□ -1.38
NcanP55066 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NcanP55066 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.42□□□□□ -1.38
NcanP55066 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NcanP55066 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
NcanP55066 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
NcanP55066 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
NcanP55066 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NcanP55066 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.42□□□□□ -1.38
NcanP55066 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.42□□□□□ -1.38
NcanP55066 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.42□□□□□ -1.38
NcanP55066 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NcanP55066 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
NcanP55066 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.42□□□□□ -1.38
NcanP55066 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NcanP55066 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.41□□□□□ -1.38
NcanP55066 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NcanP55066 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
NcanP55066 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
NcanP55066 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.41□□□□□ -1.38
NcanP55066 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.41□□□□□ -1.38
NcanP55066 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
NcanP55066 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NcanP55066 Gm24160-201ENSMUST00000104594 126 ntBASIC6.41□□□□□ -1.38
NcanP55066 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Gm12077-201ENSMUST00000117049 364 ntBASIC6.41□□□□□ -1.38
NcanP55066 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.41□□□□□ -1.38
NcanP55066 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.41□□□□□ -1.38
NcanP55066 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NcanP55066 Gm3242-201ENSMUST00000171273 485 ntBASIC6.41□□□□□ -1.38
NcanP55066 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
NcanP55066 Gm27875-201ENSMUST00000184425 123 ntBASIC6.41□□□□□ -1.38
NcanP55066 Trbv9-201ENSMUST00000194494 290 ntBASIC6.41□□□□□ -1.38
NcanP55066 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.41□□□□□ -1.38
NcanP55066 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NcanP55066 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.41□□□□□ -1.38
NcanP55066 AC154634.3-201ENSMUST00000224589 736 ntBASIC6.41□□□□□ -1.38
NcanP55066 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms