Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.98□□□□□ -1.45
HttP42859 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HttP42859 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.97□□□□□ -1.45
HttP42859 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.97□□□□□ -1.45
HttP42859 Gm14656-201ENSMUST00000120342 502 ntBASIC5.97□□□□□ -1.45
HttP42859 Gm11990-201ENSMUST00000121505 897 ntBASIC5.97□□□□□ -1.45
HttP42859 Gm24113-201ENSMUST00000157477 276 ntBASIC5.97□□□□□ -1.45
HttP42859 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HttP42859 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HttP42859 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HttP42859 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HttP42859 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC5.97□□□□□ -1.45
HttP42859 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC5.97□□□□□ -1.45
HttP42859 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.97□□□□□ -1.45
HttP42859 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.97□□□□□ -1.45
HttP42859 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HttP42859 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HttP42859 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.97□□□□□ -1.45
HttP42859 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.97□□□□□ -1.45
HttP42859 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.97□□□□□ -1.45
HttP42859 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.97□□□□□ -1.45
HttP42859 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
HttP42859 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.97□□□□□ -1.45
HttP42859 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HttP42859 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HttP42859 Gm24350-201ENSMUST00000104163 133 ntBASIC5.96□□□□□ -1.45
HttP42859 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.96□□□□□ -1.45
HttP42859 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.96□□□□□ -1.45
HttP42859 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HttP42859 Gm18442-201ENSMUST00000220925 639 ntBASIC5.96□□□□□ -1.45
HttP42859 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.96□□□□□ -1.45
HttP42859 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
HttP42859 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HttP42859 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HttP42859 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
HttP42859 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
HttP42859 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.96□□□□□ -1.45
HttP42859 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
HttP42859 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
HttP42859 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Gm8995-202ENSMUST00000208417 3490 ntBASIC5.96□□□□□ -1.46
HttP42859 Gm9308-201ENSMUST00000119073 448 ntBASIC5.96□□□□□ -1.46
HttP42859 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Gm3170-201ENSMUST00000168753 850 ntBASIC5.96□□□□□ -1.46
HttP42859 Gm3348-201ENSMUST00000177813 850 ntBASIC5.96□□□□□ -1.46
HttP42859 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.96□□□□□ -1.46
HttP42859 Gm27551-201ENSMUST00000184258 77 ntBASIC5.96□□□□□ -1.46
HttP42859 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.96□□□□□ -1.46
HttP42859 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.96□□□□□ -1.46
HttP42859 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.96□□□□□ -1.46
HttP42859 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.96□□□□□ -1.46
HttP42859 Gm23511-201ENSMUST00000083084 164 ntBASIC5.96□□□□□ -1.46
HttP42859 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC5.96□□□□□ -1.46
HttP42859 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.96□□□□□ -1.46
HttP42859 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.96□□□□□ -1.46
HttP42859 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Gm15297-201ENSMUST00000117795 290 ntBASIC5.96□□□□□ -1.46
HttP42859 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.96□□□□□ -1.46
HttP42859 Scarna13-201ENSMUST00000158164 275 ntBASIC5.96□□□□□ -1.46
HttP42859 Gm20701-201ENSMUST00000176082 347 ntBASIC5.96□□□□□ -1.46
HttP42859 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Gm38053-201ENSMUST00000193938 160 ntBASIC5.96□□□□□ -1.46
HttP42859 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HttP42859 Gm45700-201ENSMUST00000205866 347 ntBASIC5.96□□□□□ -1.46
HttP42859 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.96□□□□□ -1.46
HttP42859 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.96□□□□□ -1.46
HttP42859 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HttP42859 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.96□□□□□ -1.46
HttP42859 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HttP42859 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms