Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Sdc1P18828 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm26984-201ENSMUST00000182345 3510 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 AC154612.1-202ENSMUST00000224806 1725 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm23529-201ENSMUST00000104562 132 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm12683-201ENSMUST00000117528 415 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm11270-201ENSMUST00000117685 471 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm11501-201ENSMUST00000118039 581 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm13835-201ENSMUST00000118459 685 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm12281-201ENSMUST00000119536 298 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm14876-201ENSMUST00000120795 327 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm9697-201ENSMUST00000147052 997 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm23964-201ENSMUST00000157966 107 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm10087-201ENSMUST00000167650 330 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm22548-201ENSMUST00000174899 78 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm25640-201ENSMUST00000175378 125 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm22990-201ENSMUST00000175427 89 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm23018-201ENSMUST00000177928 109 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm29124-201ENSMUST00000186576 452 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm37196-201ENSMUST00000194762 906 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm9317-201ENSMUST00000197055 862 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm4525-201ENSMUST00000198831 254 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm18012-201ENSMUST00000204558 773 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 AC154595.2-201ENSMUST00000225067 310 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Sdc1P18828 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.73□□□□□ -1.65
Sdc1P18828 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm4953-201ENSMUST00000077309 483 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Gm8412-201ENSMUST00000077493 440 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Sdc1P18828 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sdc1P18828 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.73□□□□□ -1.65
Sdc1P18828 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm45562-201ENSMUST00000210015 1537 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm12468-201ENSMUST00000116189 404 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm11553-201ENSMUST00000120682 240 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm15349-201ENSMUST00000121154 204 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm15928-201ENSMUST00000122455 280 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm8648-201ENSMUST00000122457 221 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm23426-201ENSMUST00000122483 318 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms