Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC164295.1-201ENSMUST00000224861 186 ntBASIC4.93□□□□□ -1.62
Cdx1P18111 AC132260.1-201ENSMUST00000225499 734 ntBASIC4.93□□□□□ -1.62
Cdx1P18111 AC113198.1-201ENSMUST00000226353 832 ntBASIC4.93□□□□□ -1.62
Cdx1P18111 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdx1P18111 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
Cdx1P18111 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cdx1P18111 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cdx1P18111 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cdx1P18111 Gm23623-201ENSMUST00000082461 107 ntBASIC4.93□□□□□ -1.62
Cdx1P18111 Gm25133-201ENSMUST00000082647 130 ntBASIC4.93□□□□□ -1.62
Cdx1P18111 Snora30-201ENSMUST00000083325 130 ntBASIC4.93□□□□□ -1.62
Cdx1P18111 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cdx1P18111 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdx1P18111 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdx1P18111 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdx1P18111 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Gm8177-201ENSMUST00000181591 1336 ntBASIC4.93□□□□□ -1.62
Cdx1P18111 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx1P18111 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm9839-201ENSMUST00000195252 1437 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm12439-201ENSMUST00000117162 365 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm9429-201ENSMUST00000117804 868 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm13604-201ENSMUST00000119332 482 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Cdx1P18111 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm25722-201ENSMUST00000157498 279 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm23903-201ENSMUST00000157566 131 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm3140-201ENSMUST00000163523 481 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm4845-201ENSMUST00000179202 562 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm27970-201ENSMUST00000184854 407 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm29470-201ENSMUST00000188007 696 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm28883-201ENSMUST00000189256 369 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm43743-202ENSMUST00000198353 491 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC4.92□□□□□ -1.62
Cdx1P18111 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm8911-201ENSMUST00000213986 652 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC4.92□□□□□ -1.62
Cdx1P18111 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm4556-201ENSMUST00000217808 355 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Cdx1P18111 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC4.92□□□□□ -1.62
Cdx1P18111 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Cdx1P18111 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdx1P18111 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdx1P18111 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.91□□□□□ -1.62
Cdx1P18111 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdx1P18111 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cdx1P18111 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.91□□□□□ -1.62
Cdx1P18111 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdx1P18111 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Cdx1P18111 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms