Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm11865-201ENSMUST00000118093 859 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm13469-201ENSMUST00000118231 350 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm13798-201ENSMUST00000118285 139 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm15659-201ENSMUST00000118881 341 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm15923-201ENSMUST00000119300 1169 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm11617-201ENSMUST00000119609 639 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm15129-201ENSMUST00000119673 279 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm14898-201ENSMUST00000120202 645 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm15538-201ENSMUST00000121410 313 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm8577-201ENSMUST00000122420 986 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm16139-201ENSMUST00000160015 420 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm7420-201ENSMUST00000162836 842 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm24080-201ENSMUST00000175178 232 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm44370-201ENSMUST00000175436 112 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm18417-201ENSMUST00000176564 648 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm18727-201ENSMUST00000185981 553 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm29160-201ENSMUST00000190094 699 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm18150-201ENSMUST00000195341 645 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm8861-201ENSMUST00000196346 832 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm44258-201ENSMUST00000204925 301 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm45122-201ENSMUST00000206376 784 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm5338-201ENSMUST00000209530 639 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm18414-201ENSMUST00000210858 694 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm3912-203ENSMUST00000211024 367 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 AC153541.1-201ENSMUST00000213786 294 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm18252-203ENSMUST00000215855 757 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm18388-201ENSMUST00000222339 557 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 AC190403.1-201ENSMUST00000224515 1325 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm26079-201ENSMUST00000104066 133 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm25498-201ENSMUST00000104424 129 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm8421-201ENSMUST00000119439 305 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm15019-201ENSMUST00000120148 434 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 Gm13237-201ENSMUST00000122151 635 ntBASIC6.04□□□□□ -1.44
Pcdh1F7BJK1 BC064078-201ENSMUST00000122939 570 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms