Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm28658-201ENSMUST00000191532 615 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm32180-201ENSMUST00000192415 615 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm30598-201ENSMUST00000192620 615 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm37627-201ENSMUST00000194585 615 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm34274-201ENSMUST00000195825 615 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm44307-201ENSMUST00000204466 764 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm9357-201ENSMUST00000207138 805 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm19007-201ENSMUST00000217746 874 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 AC123658.1-201ENSMUST00000228364 867 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 AC158595.1-201ENSMUST00000217989 1435 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm37834-201ENSMUST00000194517 3035 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc9Q8VC31 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm12573-201ENSMUST00000118158 286 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm15316-201ENSMUST00000121082 421 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm12618-201ENSMUST00000121754 483 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm14728-201ENSMUST00000122196 492 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm10087-201ENSMUST00000167650 330 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm28925-201ENSMUST00000188586 168 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm37641-201ENSMUST00000193837 239 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm5711-201ENSMUST00000197896 421 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm45071-201ENSMUST00000205353 571 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm45157-201ENSMUST00000208729 401 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm18907-201ENSMUST00000209719 932 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Gm45910-201ENSMUST00000212493 1003 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 AC122295.1-201ENSMUST00000223476 388 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 AW822073-201ENSMUST00000075305 555 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc9Q8VC31 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.27
Ccdc9Q8VC31 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc9Q8VC31 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Ccdc9Q8VC31 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.15□□□□□ -1.27
Ccdc9Q8VC31 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC7.15□□□□□ -1.27
Ccdc9Q8VC31 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Ccdc9Q8VC31 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm13193-201ENSMUST00000117275 225 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm649-201ENSMUST00000117284 1054 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm13444-201ENSMUST00000119445 522 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm6451-201ENSMUST00000121488 717 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm13440-201ENSMUST00000121665 496 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm13237-201ENSMUST00000122151 635 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm26025-201ENSMUST00000158655 271 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm8582-201ENSMUST00000164061 789 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Mirt2-201ENSMUST00000175179 285 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Gm9529-201ENSMUST00000177598 579 ntBASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc9Q8VC31 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms