Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8930-201ENSMUST00000201693 768 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8412-201ENSMUST00000077493 440 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.82□□□□□ -1.48
Ccdc28bQ8CEG5 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm26289-201ENSMUST00000104169 131 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15502-201ENSMUST00000121449 208 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15022-201ENSMUST00000122074 746 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Snora47-201ENSMUST00000157483 138 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm26321-201ENSMUST00000157740 242 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm24081-201ENSMUST00000175177 125 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm17048-201ENSMUST00000179266 847 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44053-201ENSMUST00000203364 929 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm18600-201ENSMUST00000207205 505 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm18205-201ENSMUST00000209215 841 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8607-201ENSMUST00000221864 431 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm9985-201ENSMUST00000044101 510 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Snord59a-201ENSMUST00000082844 74 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28bQ8CEG5 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm14584-201ENSMUST00000118956 637 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm13735-201ENSMUST00000120217 670 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.8□□□□□ -1.48
Ccdc28bQ8CEG5 Gm25617-201ENSMUST00000179548 133 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms