Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm4989-201ENSMUST00000118711 749 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm15741-201ENSMUST00000119401 754 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm12466-201ENSMUST00000121199 620 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm15006-201ENSMUST00000121419 1122 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm13149-201ENSMUST00000122071 339 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm27855-201ENSMUST00000184122 128 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm7128-201ENSMUST00000211639 533 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm29785-201ENSMUST00000217033 383 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Gm4822-201ENSMUST00000077551 479 ntBASIC5.52□□□□□ -1.53
Spg11Q3UHA3 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Retreg1-203ENSMUST00000226438 2783 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm14842-201ENSMUST00000119577 269 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Mir6400-201ENSMUST00000184870 92 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm5318-201ENSMUST00000205249 406 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm18468-201ENSMUST00000207321 369 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm18470-201ENSMUST00000207467 420 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm18465-201ENSMUST00000207468 369 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm18464-201ENSMUST00000207803 420 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm18458-201ENSMUST00000207908 369 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm18461-201ENSMUST00000208421 420 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm37372-201ENSMUST00000193577 3311 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Spg11Q3UHA3 Gm26362-201ENSMUST00000158865 315 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm44111-201ENSMUST00000204649 399 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm11908-201ENSMUST00000117755 347 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm13818-201ENSMUST00000119441 511 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm22552-201ENSMUST00000157796 337 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm7316-201ENSMUST00000165395 445 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm18752-201ENSMUST00000192876 608 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm18150-201ENSMUST00000195341 645 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm44225-201ENSMUST00000203582 186 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm45610-201ENSMUST00000209227 784 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Gm7557-201ENSMUST00000221935 865 ntBASIC5.5□□□□□ -1.53
Spg11Q3UHA3 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms