Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp39Q3TIX9 Gm42852-201ENSMUST00000202649 1379 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm22267-201ENSMUST00000104008 131 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm14375-201ENSMUST00000119490 855 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm14554-201ENSMUST00000119548 661 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm11358-201ENSMUST00000122310 373 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm11341-201ENSMUST00000122316 447 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm25962-201ENSMUST00000157173 168 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm23441-201ENSMUST00000157268 127 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm16558-201ENSMUST00000163015 532 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm11107-201ENSMUST00000165414 505 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm4152-201ENSMUST00000172675 259 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm5871-201ENSMUST00000176461 718 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm29513-201ENSMUST00000185741 202 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm37376-201ENSMUST00000192176 453 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm43157-201ENSMUST00000198223 412 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm43436-201ENSMUST00000199308 147 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm9367-201ENSMUST00000205703 546 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm44984-201ENSMUST00000207802 394 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm32983-201ENSMUST00000208500 505 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm19987-201ENSMUST00000216339 499 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 AC109214.2-201ENSMUST00000220089 358 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp39Q3TIX9 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp39Q3TIX9 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp39Q3TIX9 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.17□□□□□ -1.42
Usp39Q3TIX9 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp39Q3TIX9 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Usp39Q3TIX9 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp39Q3TIX9 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp39Q3TIX9 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.17□□□□□ -1.42
Usp39Q3TIX9 Gm25785-201ENSMUST00000104129 125 ntBASIC6.17□□□□□ -1.42
Usp39Q3TIX9 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp39Q3TIX9 Gm13469-201ENSMUST00000118231 350 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms