Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm16250-201ENSMUST00000148974 256 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm27611-201ENSMUST00000184690 108 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm37293-201ENSMUST00000191658 295 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm6649-201ENSMUST00000199743 1165 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm45209-201ENSMUST00000207122 353 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm45610-201ENSMUST00000209227 784 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm29785-201ENSMUST00000217033 383 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 AC164302.1-201ENSMUST00000227036 433 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col17a1Q07563 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col17a1Q07563 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col17a1Q07563 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col17a1Q07563 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col17a1Q07563 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm44677-201ENSMUST00000209151 3739 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm38124-201ENSMUST00000191710 2581 ntBASIC9.24□□□□□ -0.93
Col17a1Q07563 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col17a1Q07563 Gm38366-201ENSMUST00000193127 1934 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm43425-201ENSMUST00000201793 3291 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 AC158988.1-201ENSMUST00000226731 2624 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 Snord66-201ENSMUST00000104051 75 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm15074-201ENSMUST00000117603 936 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm14472-201ENSMUST00000119815 282 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm22342-201ENSMUST00000122647 298 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm16345-201ENSMUST00000146065 158 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Mir7062-201ENSMUST00000185038 66 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm45525-201ENSMUST00000210800 389 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm7780-201ENSMUST00000214787 406 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 AC160980.2-201ENSMUST00000225131 949 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 CT025667.1-201ENSMUST00000225872 382 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm9788-201ENSMUST00000057038 906 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm22807-201ENSMUST00000082737 129 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm24706-201ENSMUST00000082806 137 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 Gm43181-201ENSMUST00000197001 2072 ntBASIC9.23□□□□□ -0.93
Col17a1Q07563 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col17a1Q07563 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.23□□□□□ -0.93
Col17a1Q07563 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC9.22□□□□□ -0.93
Col17a1Q07563 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Gm28923-201ENSMUST00000187755 322 ntBASIC9.22□□□□□ -0.93
Col17a1Q07563 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Gm37533-201ENSMUST00000193848 545 ntBASIC9.22□□□□□ -0.93
Col17a1Q07563 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 AC238676.3-201ENSMUST00000223042 154 ntBASIC9.22□□□□□ -0.93
Col17a1Q07563 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC9.22□□□□□ -0.93
Col17a1Q07563 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC9.22□□□□□ -0.93
Col17a1Q07563 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Gm10258-201ENSMUST00000091270 2123 ntBASIC9.22□□□□□ -0.93
Col17a1Q07563 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col17a1Q07563 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm45250-201ENSMUST00000209414 3592 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm12874-201ENSMUST00000117190 913 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm649-201ENSMUST00000117284 1054 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm14659-201ENSMUST00000117667 843 ntBASIC9.21□□□□□ -0.93
Col17a1Q07563 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col17a1Q07563 Gm24730-201ENSMUST00000158228 117 ntBASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms