Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox9Q04887 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox9Q04887 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sox9Q04887 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox9Q04887 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.77□□□□□ -1.33
Sox9Q04887 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.77□□□□□ -1.33
Sox9Q04887 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox9Q04887 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Sox9Q04887 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Sox9Q04887 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox9Q04887 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm13013-201ENSMUST00000119087 523 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm11481-201ENSMUST00000120069 255 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm7931-201ENSMUST00000121537 271 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox9Q04887 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm24960-201ENSMUST00000157923 90 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm23894-201ENSMUST00000158107 313 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm23891-201ENSMUST00000158114 138 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm25603-201ENSMUST00000158361 105 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm25839-201ENSMUST00000158921 103 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm6631-201ENSMUST00000193699 559 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm18838-201ENSMUST00000204855 886 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm45382-201ENSMUST00000210607 151 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox9Q04887 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm18405-201ENSMUST00000220743 511 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm9315-201ENSMUST00000222696 908 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 AC154239.2-201ENSMUST00000227859 233 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 AC125464.1-201ENSMUST00000228013 512 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox9Q04887 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox9Q04887 Mir337-201ENSMUST00000083592 97 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox9Q04887 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
Sox9Q04887 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox9Q04887 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox9Q04887 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.76□□□□□ -1.33
Sox9Q04887 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox9Q04887 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox9Q04887 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm22952-201ENSMUST00000116720 120 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm16423-201ENSMUST00000120078 947 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm15801-201ENSMUST00000120920 522 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.75□□□□□ -1.33
Sox9Q04887 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm25413-201ENSMUST00000158544 312 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Gm8783-201ENSMUST00000159764 522 ntBASIC6.75□□□□□ -1.33
Sox9Q04887 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sox9Q04887 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms