Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm8930-201ENSMUST00000201693 768 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm31861-201ENSMUST00000204563 672 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm45026-201ENSMUST00000205292 833 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm44673-201ENSMUST00000205692 996 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm6230-201ENSMUST00000208077 780 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr192-201ENSMUST00000080251 925 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm26163-201ENSMUST00000083792 178 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm38120-201ENSMUST00000195506 4642 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm44553-201ENSMUST00000206316 2037 ntBASIC5.85□□□□□ -1.47
Col8a1Q00780 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Col8a1Q00780 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col8a1Q00780 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Col8a1Q00780 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm12740-201ENSMUST00000118794 308 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm13751-201ENSMUST00000120280 752 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm14360-201ENSMUST00000120670 393 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm26346-201ENSMUST00000157525 329 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm25219-201ENSMUST00000157545 330 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm5473-201ENSMUST00000179326 642 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Col8a1Q00780 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm5711-201ENSMUST00000197896 421 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm20223-201ENSMUST00000199932 805 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm44665-201ENSMUST00000205381 251 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm19182-201ENSMUST00000207139 577 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm18586-201ENSMUST00000217265 518 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm2089-201ENSMUST00000218294 479 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm5928-201ENSMUST00000221839 466 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm19195-201ENSMUST00000222018 511 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 Gm9293-201ENSMUST00000223096 306 ntBASIC5.84□□□□□ -1.47
Col8a1Q00780 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Col8a1Q00780 AC130823.2-201ENSMUST00000226169 290 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms