Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6□□□□□ -1.45
HttP42859 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Gm44586-201ENSMUST00000207166 2737 ntBASIC6□□□□□ -1.45
HttP42859 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HttP42859 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
HttP42859 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6□□□□□ -1.45
HttP42859 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6□□□□□ -1.45
HttP42859 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6□□□□□ -1.45
HttP42859 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6□□□□□ -1.45
HttP42859 Gm44225-201ENSMUST00000203582 186 ntBASIC6□□□□□ -1.45
HttP42859 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6□□□□□ -1.45
HttP42859 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6□□□□□ -1.45
HttP42859 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HttP42859 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
HttP42859 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HttP42859 Gm24544-201ENSMUST00000103862 110 ntBASIC5.99□□□□□ -1.45
HttP42859 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Gm22501-201ENSMUST00000158981 127 ntBASIC5.99□□□□□ -1.45
HttP42859 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HttP42859 Mir7047-201ENSMUST00000184595 64 ntBASIC5.99□□□□□ -1.45
HttP42859 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.99□□□□□ -1.45
HttP42859 Gm21856-201ENSMUST00000187547 696 ntBASIC5.99□□□□□ -1.45
HttP42859 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.99□□□□□ -1.45
HttP42859 AC153961.1-201ENSMUST00000217760 385 ntBASIC5.99□□□□□ -1.45
HttP42859 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.99□□□□□ -1.45
HttP42859 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.99□□□□□ -1.45
HttP42859 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.99□□□□□ -1.45
HttP42859 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Gm12181-201ENSMUST00000121448 531 ntBASIC5.99□□□□□ -1.45
HttP42859 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.99□□□□□ -1.45
HttP42859 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HttP42859 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HttP42859 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.99□□□□□ -1.45
HttP42859 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.99□□□□□ -1.45
HttP42859 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
HttP42859 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Gm28653-201ENSMUST00000185494 5276 ntBASIC5.99□□□□□ -1.45
HttP42859 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HttP42859 Gm23193-201ENSMUST00000102427 82 ntBASIC5.99□□□□□ -1.45
HttP42859 Snord66-201ENSMUST00000104051 75 ntBASIC5.99□□□□□ -1.45
HttP42859 Gm22710-201ENSMUST00000116892 125 ntBASIC5.99□□□□□ -1.45
HttP42859 Gm5252-201ENSMUST00000189030 909 ntBASIC5.99□□□□□ -1.45
HttP42859 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.99□□□□□ -1.45
HttP42859 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.99□□□□□ -1.45
HttP42859 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HttP42859 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
HttP42859 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
HttP42859 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HttP42859 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC5.98□□□□□ -1.45
HttP42859 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.98□□□□□ -1.45
HttP42859 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.98□□□□□ -1.45
HttP42859 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Gm9173-201ENSMUST00000198054 400 ntBASIC5.98□□□□□ -1.45
HttP42859 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.98□□□□□ -1.45
HttP42859 Gm18541-201ENSMUST00000215935 538 ntBASIC5.98□□□□□ -1.45
HttP42859 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.98□□□□□ -1.45
HttP42859 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HttP42859 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Gm45358-201ENSMUST00000209492 2305 ntBASIC5.98□□□□□ -1.45
HttP42859 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.98□□□□□ -1.45
HttP42859 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.98□□□□□ -1.45
HttP42859 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HttP42859 Gm13149-201ENSMUST00000122071 339 ntBASIC5.98□□□□□ -1.45
HttP42859 Gm16254-201ENSMUST00000131528 730 ntBASIC5.98□□□□□ -1.45
HttP42859 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.98□□□□□ -1.45
HttP42859 Gm15796-201ENSMUST00000162135 204 ntBASIC5.98□□□□□ -1.45
HttP42859 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.98□□□□□ -1.45
HttP42859 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.98□□□□□ -1.45
HttP42859 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HttP42859 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms