Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm45845-201ENSMUST00000207326 582 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC4.75□□□□□ -1.65
Sdc1P18828 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm46364-201ENSMUST00000218548 319 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm19073-201ENSMUST00000219978 555 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 AC124732.4-201ENSMUST00000220930 1274 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 AC154431.2-201ENSMUST00000225215 1055 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 AC164302.1-201ENSMUST00000227036 433 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Snord59a-201ENSMUST00000082844 74 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm25099-201ENSMUST00000093716 116 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Sdc1P18828 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Sdc1P18828 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm2223-201ENSMUST00000112099 1350 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.75□□□□□ -1.65
Sdc1P18828 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sdc1P18828 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm6327-201ENSMUST00000171185 1335 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Sdc1P18828 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sdc1P18828 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sdc1P18828 Mir292-201ENSMUST00000104847 82 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm13768-201ENSMUST00000116469 929 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm12104-201ENSMUST00000120359 979 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm13363-201ENSMUST00000122008 522 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC4.74□□□□□ -1.65
Sdc1P18828 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC4.74□□□□□ -1.65
Sdc1P18828 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC4.74□□□□□ -1.65
Sdc1P18828 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC4.74□□□□□ -1.65
Sdc1P18828 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm24923-201ENSMUST00000178201 88 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm26736-201ENSMUST00000180425 1236 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm28883-201ENSMUST00000189256 369 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm7019-201ENSMUST00000194122 369 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm42428-201ENSMUST00000198677 302 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm45473-201ENSMUST00000211452 616 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm6667-201ENSMUST00000217169 564 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 CT009546.3-201ENSMUST00000220914 208 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sdc1P18828 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sdc1P18828 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sdc1P18828 Gm6166-201ENSMUST00000098689 409 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sdc1P18828 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.74□□□□□ -1.65
Sdc1P18828 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sdc1P18828 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.74□□□□□ -1.65
Sdc1P18828 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Sdc1P18828 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Sdc1P18828 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sdc1P18828 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms