Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col1a1P11087 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.9□□□□□ -1.3
Col1a1P11087 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Col1a1P11087 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col1a1P11087 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Col1a1P11087 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col1a1P11087 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col1a1P11087 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col1a1P11087 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col1a1P11087 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col1a1P11087 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col1a1P11087 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
Col1a1P11087 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.9□□□□□ -1.31
Col1a1P11087 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 Gm4989-201ENSMUST00000118711 749 ntBASIC6.9□□□□□ -1.31
Col1a1P11087 Mir1907-201ENSMUST00000122509 90 ntBASIC6.9□□□□□ -1.31
Col1a1P11087 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.9□□□□□ -1.31
Col1a1P11087 Gm28976-201ENSMUST00000188070 144 ntBASIC6.9□□□□□ -1.31
Col1a1P11087 Gm43078-201ENSMUST00000197222 168 ntBASIC6.9□□□□□ -1.31
Col1a1P11087 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.9□□□□□ -1.31
Col1a1P11087 Gm3148-201ENSMUST00000203594 612 ntBASIC6.9□□□□□ -1.31
Col1a1P11087 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
Col1a1P11087 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 Gm45660-201ENSMUST00000210267 151 ntBASIC6.9□□□□□ -1.31
Col1a1P11087 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.9□□□□□ -1.31
Col1a1P11087 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.9□□□□□ -1.31
Col1a1P11087 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Col1a1P11087 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
Col1a1P11087 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col1a1P11087 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.9□□□□□ -1.31
Col1a1P11087 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col1a1P11087 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.9□□□□□ -1.31
Col1a1P11087 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col1a1P11087 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col1a1P11087 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col1a1P11087 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col1a1P11087 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col1a1P11087 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col1a1P11087 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm22676-201ENSMUST00000116972 129 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Gm16089-201ENSMUST00000117679 336 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Gm5809-201ENSMUST00000121854 529 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Gm4874-201ENSMUST00000203589 691 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Col1a1P11087 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col1a1P11087 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.89□□□□□ -1.31
Col1a1P11087 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.89□□□□□ -1.31
Col1a1P11087 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col1a1P11087 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col1a1P11087 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Col1a1P11087 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col1a1P11087 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Gm12734-201ENSMUST00000120228 948 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Gm15428-201ENSMUST00000121352 333 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Gm11925-201ENSMUST00000121375 535 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.88□□□□□ -1.31
Col1a1P11087 Gm26318-201ENSMUST00000176507 96 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Mir7028-201ENSMUST00000185016 64 ntBASIC6.88□□□□□ -1.31
Col1a1P11087 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.88□□□□□ -1.31
Col1a1P11087 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.88□□□□□ -1.31
Col1a1P11087 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms