Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdh1F7BJK1 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Spanxn4-201ENSMUST00000172433 424 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm6726-201ENSMUST00000172786 681 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm28489-201ENSMUST00000186655 316 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm29470-201ENSMUST00000188007 696 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm28801-201ENSMUST00000188761 449 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm37383-201ENSMUST00000191750 745 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm36638-201ENSMUST00000193295 400 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm37288-201ENSMUST00000193963 334 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm37270-201ENSMUST00000194277 330 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm17918-201ENSMUST00000205315 574 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm45246-201ENSMUST00000210820 367 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 AC102582.1-201ENSMUST00000215376 378 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm6885-201ENSMUST00000217261 372 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm28392-201ENSMUST00000077630 393 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm22444-201ENSMUST00000093693 108 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Pcdh1F7BJK1 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Pcdh1F7BJK1 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms