Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm45660-201ENSMUST00000210267 151 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm20368-201ENSMUST00000220716 301 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm25147-201ENSMUST00000083030 105 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm26814-201ENSMUST00000181178 4149 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 AC133076.2-201ENSMUST00000227678 3532 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col4a6B1AVK5 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.09□□□□□ -1.44
Col4a6B1AVK5 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col4a6B1AVK5 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col4a6B1AVK5 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.09□□□□□ -1.44
Col4a6B1AVK5 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.09□□□□□ -1.44
Col4a6B1AVK5 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.09□□□□□ -1.44
Col4a6B1AVK5 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col4a6B1AVK5 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm15428-201ENSMUST00000121352 333 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm11909-201ENSMUST00000121424 759 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm12267-201ENSMUST00000121609 761 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm24940-201ENSMUST00000158326 108 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm17086-201ENSMUST00000171346 484 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm26731-201ENSMUST00000180683 543 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col4a6B1AVK5 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.08□□□□□ -1.44
Col4a6B1AVK5 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm13738-201ENSMUST00000122437 469 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm17775-201ENSMUST00000198542 258 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm45082-201ENSMUST00000206082 601 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm40692-201ENSMUST00000220411 491 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.07□□□□□ -1.44
Col4a6B1AVK5 Gm13469-201ENSMUST00000118231 350 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms