Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm23686-201ENSMUST00000083241 164 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm19231-201ENSMUST00000193212 830 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm26078-201ENSMUST00000104067 128 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm25227-201ENSMUST00000158204 112 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm24103-201ENSMUST00000174930 77 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm22650-201ENSMUST00000175138 105 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm37336-202ENSMUST00000193705 468 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm43743-202ENSMUST00000198353 491 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.09□□□□□ -1.43
Scn1aA2APX8 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1aA2APX8 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.09□□□□□ -1.44
Scn1aA2APX8 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.09□□□□□ -1.44
Scn1aA2APX8 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.09□□□□□ -1.44
Scn1aA2APX8 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Scn1aA2APX8 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm22592-201ENSMUST00000104242 131 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm3943-201ENSMUST00000118606 718 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm7309-201ENSMUST00000121670 581 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Mir1945-201ENSMUST00000157919 78 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm26595-201ENSMUST00000181585 484 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm27960-201ENSMUST00000183445 184 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms