Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm23149-201ENSMUST00000158837 230 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm22690-201ENSMUST00000175054 110 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm23617-201ENSMUST00000175410 95 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm27653-201ENSMUST00000185037 136 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm43743-202ENSMUST00000198353 491 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm44108-201ENSMUST00000203525 422 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm19116-201ENSMUST00000218592 642 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 AC124581.3-201ENSMUST00000224270 1624 ntBASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk3aQ9JKX8 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm15877-201ENSMUST00000121897 964 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm22932-201ENSMUST00000175510 72 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm24303-201ENSMUST00000178237 126 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm27219-201ENSMUST00000184633 742 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm19900-201ENSMUST00000207285 576 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm5612-201ENSMUST00000053326 375 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk3aQ9JKX8 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms