Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm16016-201ENSMUST00000120831 550 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm8902-201ENSMUST00000174341 1096 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm22392-201ENSMUST00000177971 107 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm29778-201ENSMUST00000201667 466 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm44615-201ENSMUST00000206548 358 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm25877-201ENSMUST00000104326 129 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm16383-201ENSMUST00000118122 232 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm25487-201ENSMUST00000158725 125 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm3715-201ENSMUST00000172308 617 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm37770-201ENSMUST00000192855 772 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm43345-201ENSMUST00000199484 269 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm9321-201ENSMUST00000221179 778 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.72□□□□□ -1.33
Ddx56Q9D0R4 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms