Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm4602-201ENSMUST00000203198 308 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm44279-201ENSMUST00000205154 472 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm44856-201ENSMUST00000206639 304 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm19196-201ENSMUST00000209258 357 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm5582-201ENSMUST00000075251 522 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm26442-201ENSMUST00000082588 153 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.58□□□□□ -1.52
Use1Q9CQ56 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Use1Q9CQ56 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm15765-201ENSMUST00000118407 910 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm25989-201ENSMUST00000158761 133 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm4152-201ENSMUST00000172675 259 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm20453-201ENSMUST00000173968 226 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm26557-201ENSMUST00000180756 493 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm27762-201ENSMUST00000183417 109 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm18698-201ENSMUST00000192327 668 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm37784-201ENSMUST00000193233 189 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm37341-201ENSMUST00000194680 371 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.57□□□□□ -1.52
Use1Q9CQ56 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Use1Q9CQ56 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm11256-201ENSMUST00000118109 829 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm14054-201ENSMUST00000120744 704 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm6977-201ENSMUST00000121568 512 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm13214-201ENSMUST00000122137 408 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm23631-201ENSMUST00000175291 123 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm29489-201ENSMUST00000188934 324 ntBASIC5.56□□□□□ -1.52
Use1Q9CQ56 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms