Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm37499-201ENSMUST00000194683 3478 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm42510-201ENSMUST00000196470 2258 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm15385-201ENSMUST00000118725 667 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm13473-201ENSMUST00000119289 367 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm5793-201ENSMUST00000119393 630 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm14986-201ENSMUST00000121262 1002 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm13237-201ENSMUST00000122151 635 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm12152-201ENSMUST00000122465 684 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm12833-201ENSMUST00000136112 477 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm24435-201ENSMUST00000157886 110 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm27295-201ENSMUST00000184264 153 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Mir7072-201ENSMUST00000184542 60 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm5260-201ENSMUST00000186157 949 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm28428-201ENSMUST00000188886 697 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm2979-201ENSMUST00000193442 463 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm19035-202ENSMUST00000194575 959 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm42580-201ENSMUST00000197223 753 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm9057-201ENSMUST00000198791 296 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm42673-201ENSMUST00000202676 337 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm45485-201ENSMUST00000211229 357 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 AC131085.1-201ENSMUST00000224746 656 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 AC154329.2-201ENSMUST00000225257 383 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 AC155314.1-201ENSMUST00000227624 508 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm23846-201ENSMUST00000083835 107 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.41□□□□□ -1.22
Clp1Q99LI9 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Clp1Q99LI9 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 AC174797.3-203ENSMUST00000225749 2078 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm24272-201ENSMUST00000102329 98 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm23748-201ENSMUST00000104227 131 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm11914-201ENSMUST00000117094 507 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm15181-201ENSMUST00000120142 177 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm15750-201ENSMUST00000120970 616 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm14907-201ENSMUST00000121948 854 ntBASIC7.4□□□□□ -1.22
Clp1Q99LI9 Gm11581-201ENSMUST00000122024 763 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms