Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm26991-201ENSMUST00000180950 620 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm43215-201ENSMUST00000199108 252 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm2996-201ENSMUST00000211398 537 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm45850-201ENSMUST00000212536 338 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm5080-201ENSMUST00000220341 743 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm22578-201ENSMUST00000083730 107 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 AC122357.2-201ENSMUST00000220732 1525 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.11□□□□□ -1.11
RtcbQ99LF4 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
RtcbQ99LF4 Gm37100-201ENSMUST00000193344 1353 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Mir546-201ENSMUST00000102105 121 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Mir700-201ENSMUST00000102169 79 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm26079-201ENSMUST00000104066 133 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm24173-201ENSMUST00000104130 128 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm13400-201ENSMUST00000117436 380 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm13930-201ENSMUST00000118569 368 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm13902-201ENSMUST00000120168 605 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm13118-201ENSMUST00000120402 549 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm23111-201ENSMUST00000122652 105 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm4725-201ENSMUST00000151048 587 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm22186-201ENSMUST00000157822 122 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm19560-201ENSMUST00000177510 514 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm28637-201ENSMUST00000179424 345 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm4412-201ENSMUST00000186660 433 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm21489-201ENSMUST00000189668 818 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm8929-201ENSMUST00000197781 1132 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm8891-201ENSMUST00000198546 832 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm18635-201ENSMUST00000199020 1060 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm8930-201ENSMUST00000201693 768 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm44909-201ENSMUST00000208756 165 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 AC135353.1-201ENSMUST00000215330 630 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 AC174797.2-203ENSMUST00000224017 716 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 AC168062.1-201ENSMUST00000228048 769 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.1□□□□□ -1.11
RtcbQ99LF4 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms