Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.13□□□□□ -1.43
Clrn1Q8K445 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Clrn1Q8K445 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm25760-201ENSMUST00000103989 132 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm14879-201ENSMUST00000117308 507 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm12636-201ENSMUST00000117395 624 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm11972-201ENSMUST00000118514 389 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm12889-201ENSMUST00000118684 241 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm4342-201ENSMUST00000118982 367 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm11198-201ENSMUST00000119771 974 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm15227-201ENSMUST00000121844 399 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm20454-201ENSMUST00000172713 221 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm9529-201ENSMUST00000177598 579 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm24417-201ENSMUST00000178123 79 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm24653-201ENSMUST00000178541 79 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm25934-201ENSMUST00000178642 79 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm2617-201ENSMUST00000185690 1066 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm37380-201ENSMUST00000193752 397 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm6057-201ENSMUST00000195927 314 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm43203-201ENSMUST00000200130 558 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.12□□□□□ -1.43
Clrn1Q8K445 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clrn1Q8K445 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm14985-201ENSMUST00000118693 786 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm14712-201ENSMUST00000120195 772 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm14489-201ENSMUST00000120868 901 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms