Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.27□□□□□ -1.25
Brf1Q8CFK2 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm44735-201ENSMUST00000206197 1752 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm22371-201ENSMUST00000104588 130 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm14842-201ENSMUST00000119577 269 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm7281-201ENSMUST00000160010 543 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm15257-201ENSMUST00000177680 883 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm15252-201ENSMUST00000177750 883 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm15256-201ENSMUST00000177793 883 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm15260-201ENSMUST00000179402 883 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm37358-201ENSMUST00000195492 479 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm43392-201ENSMUST00000196560 434 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Trav3n-2-201ENSMUST00000197693 334 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Trav3d-2-201ENSMUST00000199874 334 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm21461-201ENSMUST00000200382 863 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm5886-202ENSMUST00000203957 522 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm18689-201ENSMUST00000203969 902 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 AC123534.1-201ENSMUST00000224060 656 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 AC163631.1-201ENSMUST00000225041 598 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm25515-201ENSMUST00000083858 157 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Gm44193-201ENSMUST00000204822 2523 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Brf1Q8CFK2 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Brf1Q8CFK2 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Gm45548-201ENSMUST00000210076 3167 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 AC131068.3-201ENSMUST00000228438 1456 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Gm6620-201ENSMUST00000120113 715 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Gm25013-201ENSMUST00000158402 128 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Mir6992-201ENSMUST00000183342 109 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Gm37430-201ENSMUST00000193039 196 ntBASIC7.25□□□□□ -1.25
Brf1Q8CFK2 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms