Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Sox1P53783 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox1P53783 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm42700-201ENSMUST00000199071 2437 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Sox1P53783 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox1P53783 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Gm5752-201ENSMUST00000117771 594 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm15715-201ENSMUST00000118032 283 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm13640-201ENSMUST00000118445 264 ntBASIC7.1□□□□□ -1.27
Sox1P53783 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Sox1P53783 Gm16412-201ENSMUST00000121602 273 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm13237-201ENSMUST00000122151 635 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox1P53783 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm23259-201ENSMUST00000158318 303 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm10177-202ENSMUST00000161698 207 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Mir3110-201ENSMUST00000175053 80 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm24824-201ENSMUST00000175097 78 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm2950-201ENSMUST00000185530 520 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm29519-201ENSMUST00000186994 398 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm28997-201ENSMUST00000188759 429 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm37265-201ENSMUST00000191698 885 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm37979-201ENSMUST00000193065 712 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm37550-201ENSMUST00000193230 463 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm37375-201ENSMUST00000193859 387 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm37385-201ENSMUST00000195223 387 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm42622-201ENSMUST00000197229 355 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC7.1□□□□□ -1.27
Sox1P53783 Gm42625-201ENSMUST00000198611 922 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm43798-201ENSMUST00000202056 394 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm17918-201ENSMUST00000205315 574 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm17992-201ENSMUST00000207346 1072 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm45343-201ENSMUST00000210452 828 ntBASIC7.1□□□□□ -1.27
Sox1P53783 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Gm46203-201ENSMUST00000218130 478 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Olfr790-204ENSMUST00000218901 1070 ntBASIC7.1□□□□□ -1.27
Sox1P53783 CT025525.3-201ENSMUST00000228858 366 ntBASIC7.1□□□□□ -1.27
Sox1P53783 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox1P53783 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox1P53783 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox1P53783 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox1P53783 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC7.1□□□□□ -1.27
Sox1P53783 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Gm37181-201ENSMUST00000192513 1727 ntBASIC7.1□□□□□ -1.27
Sox1P53783 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox1P53783 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox1P53783 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.09□□□□□ -1.27
Sox1P53783 AC122426.1-201ENSMUST00000214736 2235 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 AC124746.1-201ENSMUST00000227535 1300 ntBASIC7.09□□□□□ -1.27
Sox1P53783 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Sox1P53783 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox1P53783 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Sox1P53783 AC158686.1-201ENSMUST00000218068 2332 ntBASIC7.09□□□□□ -1.27
Sox1P53783 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Sox1P53783 Gm25917-201ENSMUST00000104267 130 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms