Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm17992-201ENSMUST00000207346 1072 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cux1P53564 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cux1P53564 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cux1P53564 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC9.04□□□□□ -0.96
Cux1P53564 Gm45084-201ENSMUST00000207096 1957 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Cux1P53564 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 Gm25422-201ENSMUST00000104219 129 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm14515-201ENSMUST00000121327 216 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm13007-201ENSMUST00000121866 365 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm26086-201ENSMUST00000157902 263 ntBASIC9.04□□□□□ -0.96
Cux1P53564 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC9.04□□□□□ -0.96
Cux1P53564 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC9.04□□□□□ -0.96
Cux1P53564 Gm37436-201ENSMUST00000193842 1085 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm18702-201ENSMUST00000196923 588 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm18007-201ENSMUST00000205019 844 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm6070-201ENSMUST00000207275 419 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm19256-201ENSMUST00000218550 231 ntBASIC9.04□□□□□ -0.96
Cux1P53564 Gm19168-201ENSMUST00000218804 1091 ntBASIC9.04□□□□□ -0.96
Cux1P53564 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Cux1P53564 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cux1P53564 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Cux1P53564 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC9.04□□□□□ -0.96
Cux1P53564 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cux1P53564 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cux1P53564 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cux1P53564 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
Cux1P53564 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cux1P53564 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cux1P53564 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC9.03□□□□□ -0.96
Cux1P53564 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cux1P53564 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cux1P53564 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Cux1P53564 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC9.03□□□□□ -0.96
Cux1P53564 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cux1P53564 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cux1P53564 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cux1P53564 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cux1P53564 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cux1P53564 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC9.03□□□□□ -0.96
Cux1P53564 Gm44539-201ENSMUST00000206010 238 ntBASIC9.03□□□□□ -0.96
Cux1P53564 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC9.03□□□□□ -0.96
Cux1P53564 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC9.03□□□□□ -0.96
Cux1P53564 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cux1P53564 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cux1P53564 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Cux1P53564 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cux1P53564 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cux1P53564 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cux1P53564 Gm45548-201ENSMUST00000210076 3167 ntBASIC9.02□□□□□ -0.96
Cux1P53564 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cux1P53564 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Cux1P53564 Gm9923-201ENSMUST00000217785 1836 ntBASIC9.02□□□□□ -0.96
Cux1P53564 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC9.02□□□□□ -0.96
Cux1P53564 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Cux1P53564 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC9.02□□□□□ -0.97
Cux1P53564 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Cux1P53564 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cux1P53564 Gm7309-201ENSMUST00000121670 581 ntBASIC9.02□□□□□ -0.97
Cux1P53564 Gm26167-201ENSMUST00000158423 253 ntBASIC9.02□□□□□ -0.97
Cux1P53564 Gm9006-201ENSMUST00000165520 841 ntBASIC9.02□□□□□ -0.97
Cux1P53564 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Gm44243-201ENSMUST00000204323 692 ntBASIC9.02□□□□□ -0.97
Cux1P53564 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC9.02□□□□□ -0.97
Cux1P53564 AC154738.7-201ENSMUST00000228606 579 ntBASIC9.02□□□□□ -0.97
Cux1P53564 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC9.02□□□□□ -0.97
Cux1P53564 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC9.02□□□□□ -0.97
Cux1P53564 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Cux1P53564 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
Cux1P53564 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cux1P53564 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cux1P53564 Gm42436-201ENSMUST00000198804 3656 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms