Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Col18a1P39061 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col18a1P39061 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm13740-201ENSMUST00000120590 310 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC8.05□□□□□ -1.12
Col18a1P39061 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm16456-201ENSMUST00000174431 920 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm4831-201ENSMUST00000174626 594 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm37599-201ENSMUST00000193067 489 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm7181-201ENSMUST00000202197 434 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 AC161250.1-201ENSMUST00000213426 1111 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC8.05□□□□□ -1.12
Col18a1P39061 Supt4b-201ENSMUST00000214434 351 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 AC153532.1-201ENSMUST00000218126 1111 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 AC162467.1-201ENSMUST00000220254 621 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Mir31-201ENSMUST00000083474 106 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col18a1P39061 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col18a1P39061 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col18a1P39061 CT572985.1-201ENSMUST00000220599 4714 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 AC110043.1-201ENSMUST00000220278 1627 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col18a1P39061 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Col18a1P39061 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Col18a1P39061 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm6461-201ENSMUST00000120015 633 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm15166-201ENSMUST00000120790 385 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col18a1P39061 Mir6539-201ENSMUST00000183732 110 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm3489-201ENSMUST00000190083 528 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm28567-201ENSMUST00000190270 693 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm37044-201ENSMUST00000193531 693 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm38369-201ENSMUST00000195101 693 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm44138-201ENSMUST00000204939 271 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC8.05□□□□□ -1.12
Col18a1P39061 AC183092.2-201ENSMUST00000225542 1153 ntBASIC8.05□□□□□ -1.12
Col18a1P39061 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col18a1P39061 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 AC164107.1-202ENSMUST00000228953 1816 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm42686-201ENSMUST00000199172 4108 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm42874-201ENSMUST00000198888 1774 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Gm15394-201ENSMUST00000119656 1308 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Gm13681-201ENSMUST00000117925 210 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC8.04□□□□□ -1.12
Col18a1P39061 Mir6337-201ENSMUST00000184194 105 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Gm18407-201ENSMUST00000192126 790 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Gm6140-201ENSMUST00000192494 966 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col18a1P39061 Gm44952-201ENSMUST00000204443 433 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Gm18904-201ENSMUST00000218756 329 ntBASIC8.04□□□□□ -1.12
Col18a1P39061 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col18a1P39061 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col18a1P39061 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col18a1P39061 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms