Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 Gm21731-201ENSMUST00000079524 489 ntBASIC6.77□□□□□ -1.33
Usp4P35123 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp4P35123 Mir106b-201ENSMUST00000083580 82 ntBASIC6.77□□□□□ -1.33
Usp4P35123 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Usp4P35123 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp4P35123 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.77□□□□□ -1.33
Usp4P35123 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.77□□□□□ -1.33
Usp4P35123 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp4P35123 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp4P35123 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Usp4P35123 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Usp4P35123 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.77□□□□□ -1.33
Usp4P35123 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Usp4P35123 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Usp4P35123 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp4P35123 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp4P35123 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp4P35123 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.76□□□□□ -1.33
Usp4P35123 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Gm26377-201ENSMUST00000102184 108 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Gm14795-201ENSMUST00000118461 471 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm12988-201ENSMUST00000119054 478 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm15621-201ENSMUST00000119162 364 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm11609-201ENSMUST00000121926 793 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm25179-201ENSMUST00000122632 128 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Usp4P35123 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.76□□□□□ -1.33
Usp4P35123 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.76□□□□□ -1.33
Usp4P35123 Gm20615-201ENSMUST00000177503 705 ntBASIC6.76□□□□□ -1.33
Usp4P35123 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Gm7867-201ENSMUST00000189856 546 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm28586-201ENSMUST00000189857 456 ntBASIC6.76□□□□□ -1.33
Usp4P35123 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Gm9931-201ENSMUST00000193584 1185 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm5885-202ENSMUST00000203357 528 ntBASIC6.76□□□□□ -1.33
Usp4P35123 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC6.76□□□□□ -1.33
Usp4P35123 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp4P35123 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Usp4P35123 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.76□□□□□ -1.33
Usp4P35123 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Usp4P35123 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp4P35123 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp4P35123 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp4P35123 Mir296-201ENSMUST00000083587 79 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Usp4P35123 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Usp4P35123 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.76□□□□□ -1.33
Usp4P35123 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp4P35123 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp4P35123 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.76□□□□□ -1.33
Usp4P35123 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.75□□□□□ -1.33
Usp4P35123 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Usp4P35123 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Usp4P35123 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.75□□□□□ -1.33
Usp4P35123 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
Usp4P35123 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp4P35123 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms