Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm44091-201ENSMUST00000205212 649 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm2926-201ENSMUST00000205625 239 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm44865-201ENSMUST00000207240 531 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Hoxc11P31313 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Hoxc11P31313 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
Hoxc11P31313 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm15016-201ENSMUST00000117300 720 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm12618-201ENSMUST00000121754 483 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm25342-201ENSMUST00000157459 122 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm17366-201ENSMUST00000167629 187 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm18833-201ENSMUST00000173218 862 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm26381-201ENSMUST00000174895 92 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm29519-201ENSMUST00000186994 398 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm37991-201ENSMUST00000194297 696 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm42799-201ENSMUST00000201331 328 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.09□□□□□ -1.43
Hoxc11P31313 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 AV026068-216ENSMUST00000223874 328 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 AL645546.2-201ENSMUST00000224526 265 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.09□□□□□ -1.43
Hoxc11P31313 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxc11P31313 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.09□□□□□ -1.44
Hoxc11P31313 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
Hoxc11P31313 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Hoxc11P31313 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Hoxc11P31313 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm25795-201ENSMUST00000104421 132 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm7350-201ENSMUST00000120964 636 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm25962-201ENSMUST00000157173 168 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm23894-201ENSMUST00000158107 313 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms