Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm17217-201ENSMUST00000166613 469 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.02□□□□□ -1.45
Lire1P11260 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm38237-201ENSMUST00000193366 376 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm37177-201ENSMUST00000193768 417 ntBASIC6.02□□□□□ -1.45
Lire1P11260 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.02□□□□□ -1.45
Lire1P11260 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Gm45628-201ENSMUST00000210849 274 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm4556-201ENSMUST00000217808 355 ntBASIC6.02□□□□□ -1.45
Lire1P11260 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm17849-201ENSMUST00000219788 853 ntBASIC6.02□□□□□ -1.45
Lire1P11260 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.02□□□□□ -1.45
Lire1P11260 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Lire1P11260 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Lire1P11260 AW822073-201ENSMUST00000075305 555 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm25133-201ENSMUST00000082647 130 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm26130-201ENSMUST00000083171 138 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm22351-201ENSMUST00000083925 107 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Lire1P11260 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.02□□□□□ -1.45
Lire1P11260 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.02□□□□□ -1.45
Lire1P11260 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.01□□□□□ -1.45
Lire1P11260 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Gm37363-201ENSMUST00000192336 2233 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lire1P11260 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm15349-201ENSMUST00000121154 204 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm6047-201ENSMUST00000167221 574 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Mir5617-201ENSMUST00000176786 57 ntBASIC6.01□□□□□ -1.45
Lire1P11260 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm21392-201ENSMUST00000182950 972 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Gm9320-201ENSMUST00000184151 473 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Gm27299-201ENSMUST00000184593 103 ntBASIC6.01□□□□□ -1.45
Lire1P11260 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Gm43141-201ENSMUST00000199695 274 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Gm43762-201ENSMUST00000201521 295 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Gm42673-201ENSMUST00000202676 337 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Gm44604-201ENSMUST00000205475 496 ntBASIC6.01□□□□□ -1.45
Lire1P11260 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.01□□□□□ -1.45
Lire1P11260 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Lire1P11260 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.01□□□□□ -1.45
Lire1P11260 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.01□□□□□ -1.45
Lire1P11260 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.01□□□□□ -1.45
Lire1P11260 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.01□□□□□ -1.45
Lire1P11260 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lire1P11260 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lire1P11260 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms