Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Col1a1P11087 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.93□□□□□ -1.3
Col1a1P11087 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col1a1P11087 Gm23624-201ENSMUST00000082463 321 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col1a1P11087 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col1a1P11087 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Col1a1P11087 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col1a1P11087 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm3216-201ENSMUST00000166927 486 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Gm8358-201ENSMUST00000167222 555 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Gm3141-201ENSMUST00000168726 499 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.92□□□□□ -1.3
Col1a1P11087 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.92□□□□□ -1.3
Col1a1P11087 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.92□□□□□ -1.3
Col1a1P11087 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Col1a1P11087 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Col1a1P11087 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.92□□□□□ -1.3
Col1a1P11087 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Col1a1P11087 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm23965-201ENSMUST00000157969 142 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Gm27855-201ENSMUST00000184122 128 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Gm29124-201ENSMUST00000186576 452 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Gm6520-201ENSMUST00000200636 410 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm44053-201ENSMUST00000203364 929 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.92□□□□□ -1.3
Col1a1P11087 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.92□□□□□ -1.3
Col1a1P11087 Gm19174-201ENSMUST00000216944 956 ntBASIC6.92□□□□□ -1.3
Col1a1P11087 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Col1a1P11087 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.91□□□□□ -1.3
Col1a1P11087 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.91□□□□□ -1.3
Col1a1P11087 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col1a1P11087 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm12267-201ENSMUST00000121609 761 ntBASIC6.91□□□□□ -1.3
Col1a1P11087 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm25019-201ENSMUST00000179732 110 ntBASIC6.91□□□□□ -1.3
Col1a1P11087 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col1a1P11087 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Col1a1P11087 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm17981-201ENSMUST00000191109 739 ntBASIC6.91□□□□□ -1.3
Col1a1P11087 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.91□□□□□ -1.3
Col1a1P11087 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.91□□□□□ -1.3
Col1a1P11087 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col1a1P11087 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col1a1P11087 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col1a1P11087 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col1a1P11087 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col1a1P11087 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col1a1P11087 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Col1a1P11087 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.9□□□□□ -1.3
Col1a1P11087 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms