Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm23233-201ENSMUST00000157301 137 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Mir7020-201ENSMUST00000183787 70 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm18969-201ENSMUST00000189423 730 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm38670-201ENSMUST00000199248 77 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm22807-201ENSMUST00000082737 129 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm24525-201ENSMUST00000082917 151 ntBASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.54□□□□□ -1.36
Scn3aA2ASI5 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm25227-201ENSMUST00000158204 112 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm27355-201ENSMUST00000185045 128 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm37716-201ENSMUST00000193553 947 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm9480-201ENSMUST00000198038 616 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm43148-201ENSMUST00000198237 520 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scn3aA2ASI5 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.52□□□□□ -1.36
Scn3aA2ASI5 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC6.52□□□□□ -1.36
Scn3aA2ASI5 Gm15715-201ENSMUST00000118032 283 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm14836-201ENSMUST00000118567 471 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm13473-201ENSMUST00000119289 367 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm3216-201ENSMUST00000166927 486 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm3141-201ENSMUST00000168726 499 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Mir3080-201ENSMUST00000175010 79 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm37308-201ENSMUST00000194684 100 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm14267-201ENSMUST00000119751 496 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm12936-201ENSMUST00000121439 301 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm7309-201ENSMUST00000121670 581 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm25962-201ENSMUST00000157173 168 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm26211-201ENSMUST00000158578 129 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm17121-201ENSMUST00000170414 847 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm22993-201ENSMUST00000175423 254 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm17222-201ENSMUST00000180135 847 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms