Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC159472.1-201ENSMUST00000218178 463 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm7252-201ENSMUST00000223284 456 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm24621-201ENSMUST00000082679 140 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 n-R5s168-201ENSMUST00000083948 104 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 AC171003.1-201ENSMUST00000221667 1665 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm43254-201ENSMUST00000199187 2491 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 AC134917.1-201ENSMUST00000220517 1449 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm16394-201ENSMUST00000117289 675 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm12842-201ENSMUST00000117298 476 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm11759-201ENSMUST00000121742 464 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm23386-201ENSMUST00000158585 144 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm18006-201ENSMUST00000177411 662 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm28996-201ENSMUST00000190316 721 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm37946-201ENSMUST00000192064 347 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm38122-201ENSMUST00000192679 885 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm2229-201ENSMUST00000193328 710 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm45157-201ENSMUST00000208729 401 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm18414-201ENSMUST00000210858 694 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm5185-201ENSMUST00000080271 619 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm4973-201ENSMUST00000206925 1334 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Clp1Q99LI9 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.42□□□□□ -1.22
Clp1Q99LI9 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms