Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14727-201ENSMUST00000118526 525 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm15126-201ENSMUST00000118631 833 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm8421-201ENSMUST00000119439 305 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm14721-201ENSMUST00000121381 525 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm16236-201ENSMUST00000159588 379 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm17154-201ENSMUST00000165748 431 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Adgrg4-206ENSMUST00000168724 531 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm27185-201ENSMUST00000184296 247 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm28739-201ENSMUST00000185415 696 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm6717-201ENSMUST00000185549 838 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm29259-201ENSMUST00000186396 694 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm28949-201ENSMUST00000187805 696 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm28483-201ENSMUST00000189519 696 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm32347-201ENSMUST00000192944 696 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm34144-201ENSMUST00000197039 259 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm44471-201ENSMUST00000197963 100 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm44409-201ENSMUST00000198810 166 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm42652-201ENSMUST00000199073 614 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm7463-201ENSMUST00000201541 547 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm9652-201ENSMUST00000209345 163 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm46192-201ENSMUST00000217894 326 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm25079-201ENSMUST00000082529 203 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm42728-201ENSMUST00000202644 1552 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm7739-201ENSMUST00000221131 1560 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm2348-201ENSMUST00000108782 300 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm12492-201ENSMUST00000117665 564 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm8662-201ENSMUST00000118644 574 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 H3f3c-201ENSMUST00000119459 411 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm12873-201ENSMUST00000119988 422 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm14383-201ENSMUST00000121637 386 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm22024-201ENSMUST00000122733 287 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm25979-201ENSMUST00000157177 138 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm24438-201ENSMUST00000157893 115 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Gm24534-201ENSMUST00000157949 291 ntBASIC7.94□□□□□ -1.14
Trim47Q8C0E3 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms