Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim41Q5NCC3 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 AC154270.2-201ENSMUST00000226755 2306 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm22774-201ENSMUST00000102084 109 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm23311-201ENSMUST00000104152 134 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm12268-201ENSMUST00000118398 442 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm24592-201ENSMUST00000122505 106 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm25981-201ENSMUST00000157921 295 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm20620-201ENSMUST00000177528 168 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 n-R5s209-201ENSMUST00000179494 119 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Mir7220-201ENSMUST00000183978 60 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm8367-201ENSMUST00000186145 887 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Vmn1r82-202ENSMUST00000191002 918 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Igkv3-8-201ENSMUST00000197635 339 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm42584-201ENSMUST00000201404 220 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm44910-201ENSMUST00000208451 396 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm2975-201ENSMUST00000209710 820 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm18225-201ENSMUST00000216708 742 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm19047-201ENSMUST00000220922 1099 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 AC127242.3-201ENSMUST00000222009 580 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 AC165157.1-201ENSMUST00000222981 580 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 AC105324.1-201ENSMUST00000227844 386 ntBASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trim41Q5NCC3 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm38244-201ENSMUST00000191737 2586 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm25111-201ENSMUST00000116686 147 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm11624-201ENSMUST00000118579 1041 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm12710-201ENSMUST00000119011 216 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm26729-201ENSMUST00000180744 352 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm8245-201ENSMUST00000182434 987 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm27919-201ENSMUST00000185163 107 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm5692-201ENSMUST00000187254 1057 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm3321-201ENSMUST00000200603 1129 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm42896-201ENSMUST00000201249 1113 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 AC152951.1-201ENSMUST00000218907 266 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 AC139568.1-201ENSMUST00000222878 486 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 AC164294.1-201ENSMUST00000224682 688 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 CU062626.1-201ENSMUST00000225248 505 ntBASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim41Q5NCC3 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim41Q5NCC3 Gm42679-201ENSMUST00000197086 2906 ntBASIC12.46□□□□□ -0.42
Trim41Q5NCC3 Gm43519-201ENSMUST00000197239 1872 ntBASIC12.46□□□□□ -0.42
Trim41Q5NCC3 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim41Q5NCC3 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim41Q5NCC3 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim41Q5NCC3 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim41Q5NCC3 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trim41Q5NCC3 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms