Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm232-201ENSMUST00000216549 2559 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm12110-201ENSMUST00000121601 579 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm15501-202ENSMUST00000140687 625 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm24745-201ENSMUST00000157840 85 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm18407-201ENSMUST00000192126 790 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm5288-201ENSMUST00000198323 1119 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm9038-201ENSMUST00000203400 604 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm4874-201ENSMUST00000203589 691 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 AC154841.1-201ENSMUST00000227263 1479 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm14769-201ENSMUST00000118590 432 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm12884-201ENSMUST00000120371 325 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm12293-201ENSMUST00000121898 590 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm25179-201ENSMUST00000122632 128 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm44833-201ENSMUST00000208368 331 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC3.92□□□□□ -1.78
PrkdcP97313 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PrkdcP97313 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PrkdcP97313 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm42508-201ENSMUST00000199972 3292 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 AC154461.6-201ENSMUST00000224815 2630 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm38118-201ENSMUST00000192052 2222 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm3267-201ENSMUST00000118671 473 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC3.92□□□□□ -1.78
PrkdcP97313 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm9710-201ENSMUST00000198053 499 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm6051-201ENSMUST00000201529 352 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm7128-201ENSMUST00000211639 533 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm6820-201ENSMUST00000188803 2173 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PrkdcP97313 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm8401-201ENSMUST00000120248 1739 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm44898-201ENSMUST00000205934 2223 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm15168-201ENSMUST00000121057 316 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm43235-201ENSMUST00000200121 297 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC3.92□□□□□ -1.78
PrkdcP97313 AC157515.1-201ENSMUST00000220953 450 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 AC129085.2-201ENSMUST00000223763 2800 ntBASIC3.92□□□□□ -1.78
PrkdcP97313 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PrkdcP97313 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PrkdcP97313 Gm28583-201ENSMUST00000188903 2141 ntBASIC3.91□□□□□ -1.78
PrkdcP97313 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms