Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm22267-201ENSMUST00000104008 131 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.48□□□□□ -1.37
Tpm1P58771 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm11107-201ENSMUST00000165414 505 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm29124-201ENSMUST00000186576 452 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Gm37774-201ENSMUST00000194401 245 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm44053-201ENSMUST00000203364 929 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm8137-201ENSMUST00000218997 463 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm6104-201ENSMUST00000078030 603 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm24036-201ENSMUST00000082868 156 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Tpm1P58771 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Tpm1P58771 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Tpm1P58771 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm13770-201ENSMUST00000117149 305 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm8250-201ENSMUST00000117398 774 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm13679-201ENSMUST00000118678 484 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm11227-201ENSMUST00000119774 471 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm11370-201ENSMUST00000120583 260 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm25281-201ENSMUST00000157270 104 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Scarna10-201ENSMUST00000158992 325 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm18006-201ENSMUST00000177411 662 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm9556-201ENSMUST00000182938 940 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm18700-201ENSMUST00000185791 553 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm37196-201ENSMUST00000194762 906 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm18290-201ENSMUST00000202900 844 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm45722-201ENSMUST00000213075 466 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.47□□□□□ -1.37
Tpm1P58771 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Tpm1P58771 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
Tpm1P58771 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.47□□□□□ -1.37
Tpm1P58771 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Tpm1P58771 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.47□□□□□ -1.37
Tpm1P58771 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Tpm1P58771 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Tpm1P58771 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Tpm1P58771 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms