Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm17935-201ENSMUST00000196649 772 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm8896-201ENSMUST00000197434 1106 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm7285-201ENSMUST00000198801 580 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm29817-201ENSMUST00000210098 172 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC7.12□□□□□ -1.27
Sox1P53783 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.12□□□□□ -1.27
Sox1P53783 AC133176.1-201ENSMUST00000226668 219 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox1P53783 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
Sox1P53783 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Sox1P53783 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.12□□□□□ -1.27
Sox1P53783 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Sox1P53783 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox1P53783 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Sox1P53783 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sox1P53783 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sox1P53783 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Gm11708-201ENSMUST00000119530 832 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm5406-201ENSMUST00000120054 766 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.11□□□□□ -1.27
Sox1P53783 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.11□□□□□ -1.27
Sox1P53783 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Gm4373-201ENSMUST00000178571 556 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Mir6403-201ENSMUST00000185007 129 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm29534-201ENSMUST00000187328 382 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm18117-201ENSMUST00000187720 742 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC7.11□□□□□ -1.27
Sox1P53783 Gm43580-201ENSMUST00000202892 284 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm5990-201ENSMUST00000203126 746 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm7639-201ENSMUST00000212608 484 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Gm18228-201ENSMUST00000217297 1091 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.11□□□□□ -1.27
Sox1P53783 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.11□□□□□ -1.27
Sox1P53783 CT030166.1-201ENSMUST00000222654 357 ntBASIC7.11□□□□□ -1.27
Sox1P53783 AC154626.1-201ENSMUST00000226070 311 ntBASIC7.11□□□□□ -1.27
Sox1P53783 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.11□□□□□ -1.27
Sox1P53783 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sox1P53783 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Sox1P53783 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.11□□□□□ -1.27
Sox1P53783 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Gm10997-201ENSMUST00000210294 1500 ntBASIC7.11□□□□□ -1.27
Sox1P53783 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox1P53783 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Sox1P53783 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms