Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Brca1P48754 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.7□□□□□ -1.34
Brca1P48754 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.7□□□□□ -1.34
Brca1P48754 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Brca1P48754 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm11925-201ENSMUST00000121375 535 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Gm13077-201ENSMUST00000121941 484 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm8358-201ENSMUST00000167222 555 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Gm20480-201ENSMUST00000173953 250 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Gm20545-201ENSMUST00000174739 210 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Brca1P48754 Mir7687-201ENSMUST00000184722 59 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm8999-201ENSMUST00000204951 969 ntBASIC6.7□□□□□ -1.34
Brca1P48754 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.7□□□□□ -1.34
Brca1P48754 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Brca1P48754 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.7□□□□□ -1.34
Brca1P48754 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Brca1P48754 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Brca1P48754 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.7□□□□□ -1.34
Brca1P48754 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Brca1P48754 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.7□□□□□ -1.34
Brca1P48754 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Brca1P48754 Gm11908-201ENSMUST00000117755 347 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm5353-201ENSMUST00000139800 793 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm24692-201ENSMUST00000157761 146 ntBASIC6.69□□□□□ -1.34
Brca1P48754 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.69□□□□□ -1.34
Brca1P48754 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm7733-201ENSMUST00000199038 919 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Gm42646-201ENSMUST00000202233 914 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm6009-201ENSMUST00000210848 280 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.69□□□□□ -1.34
Brca1P48754 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Brca1P48754 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.69□□□□□ -1.34
Brca1P48754 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Brca1P48754 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC6.69□□□□□ -1.34
Brca1P48754 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Brca1P48754 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Brca1P48754 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Brca1P48754 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Gm9429-201ENSMUST00000117804 868 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm13488-201ENSMUST00000120419 179 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm15428-201ENSMUST00000121352 333 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm6067-201ENSMUST00000121648 491 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.69□□□□□ -1.34
Brca1P48754 Mir7685-201ENSMUST00000183555 62 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm17981-201ENSMUST00000191109 739 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.69□□□□□ -1.34
Brca1P48754 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.69□□□□□ -1.34
Brca1P48754 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Brca1P48754 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Brca1P48754 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Brca1P48754 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.68□□□□□ -1.34
Brca1P48754 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.68□□□□□ -1.34
Brca1P48754 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Brca1P48754 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms