Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sox6P40645 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Sox6P40645 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sox6P40645 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Sox6P40645 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Sox6P40645 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Sox6P40645 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Sox6P40645 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.59□□□□□ -1.52
Sox6P40645 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.59□□□□□ -1.52
Sox6P40645 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sox6P40645 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sox6P40645 Gm22714-201ENSMUST00000116894 78 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm13311-201ENSMUST00000117863 379 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.58□□□□□ -1.52
Sox6P40645 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm5947-201ENSMUST00000179156 714 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm5645-201ENSMUST00000179597 714 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Sox6P40645 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Gm37838-201ENSMUST00000194464 312 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm5694-201ENSMUST00000195648 641 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Gm43743-202ENSMUST00000198353 491 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Gm44538-201ENSMUST00000205615 348 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.58□□□□□ -1.52
Sox6P40645 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Gm5055-201ENSMUST00000215697 581 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm19212-201ENSMUST00000216642 862 ntBASIC5.58□□□□□ -1.52
Sox6P40645 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm18955-201ENSMUST00000223173 649 ntBASIC5.58□□□□□ -1.52
Sox6P40645 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sox6P40645 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sox6P40645 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Sox6P40645 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.58□□□□□ -1.52
Sox6P40645 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Sox6P40645 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.58□□□□□ -1.52
Sox6P40645 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sox6P40645 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sox6P40645 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox6P40645 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.57□□□□□ -1.52
Sox6P40645 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.57□□□□□ -1.52
Sox6P40645 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Sox6P40645 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.57□□□□□ -1.52
Sox6P40645 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.57□□□□□ -1.52
Sox6P40645 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sox6P40645 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sox6P40645 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sox6P40645 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Gm13991-201ENSMUST00000120190 648 ntBASIC5.57□□□□□ -1.52
Sox6P40645 Gm13593-201ENSMUST00000121329 692 ntBASIC5.57□□□□□ -1.52
Sox6P40645 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.57□□□□□ -1.52
Sox6P40645 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.57□□□□□ -1.52
Sox6P40645 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox6P40645 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.57□□□□□ -1.52
Sox6P40645 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sox6P40645 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sox6P40645 Gm27348-201ENSMUST00000184511 170 ntBASIC5.57□□□□□ -1.52
Sox6P40645 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox6P40645 Gm28586-201ENSMUST00000189857 456 ntBASIC5.57□□□□□ -1.52
Sox6P40645 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms