Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm42646-201ENSMUST00000202233 914 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm9788-201ENSMUST00000057038 906 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm15333-201ENSMUST00000118825 364 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm8214-201ENSMUST00000172123 351 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm29551-201ENSMUST00000190913 698 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm37103-201ENSMUST00000191830 115 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm15603-201ENSMUST00000119252 492 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm3841-201ENSMUST00000191399 451 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm44316-201ENSMUST00000199274 97 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm21617-201ENSMUST00000188297 691 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Snord22-201ENSMUST00000083153 126 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm13006-201ENSMUST00000118683 214 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Mir6905-201ENSMUST00000184228 70 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm29778-201ENSMUST00000201667 466 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm37510-201ENSMUST00000194151 4762 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Gm9597-202ENSMUST00000227632 1387 ntBASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a3E9PWQ3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm44902-201ENSMUST00000206177 805 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Grik1-209ENSMUST00000227986 2942 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm22094-201ENSMUST00000158976 117 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm44002-201ENSMUST00000205134 594 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Dpysl2-201ENSMUST00000022629 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm14304-201ENSMUST00000117272 446 ntBASIC5.68□□□□□ -1.5
Col6a3E9PWQ3 Gm12040-201ENSMUST00000118357 537 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms