Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm20486-201ENSMUST00000101544 128 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm12099-201ENSMUST00000118660 750 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm25826-201ENSMUST00000157090 137 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm26106-201ENSMUST00000157254 228 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm23995-201ENSMUST00000158060 129 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm24767-201ENSMUST00000158509 95 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm3715-201ENSMUST00000172308 617 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm3650-201ENSMUST00000180600 747 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm27193-201ENSMUST00000184217 586 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm37966-201ENSMUST00000193122 326 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm44239-201ENSMUST00000204228 271 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm45156-201ENSMUST00000207255 439 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm45850-201ENSMUST00000212536 338 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Cma2-202ENSMUST00000228263 857 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Upk3aQ9JKX8 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Upk3aQ9JKX8 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Upk3aQ9JKX8 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
Upk3aQ9JKX8 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Upk3aQ9JKX8 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Upk3aQ9JKX8 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm13772-201ENSMUST00000118431 317 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm14805-201ENSMUST00000120172 340 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm12488-201ENSMUST00000122449 499 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm2058-201ENSMUST00000178791 560 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm4845-201ENSMUST00000179202 562 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm10410-201ENSMUST00000180138 384 ntBASIC5.71□□□□□ -1.5
Upk3aQ9JKX8 Gm26898-201ENSMUST00000181678 384 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms